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presidio/samples/python/transformers_recognizer/configuration.py

112 lines
3.9 KiB
Python

STANFORD_COFIGURATION = {
'DEFAULT_MODEL_PATH': "StanfordAIMI/stanford-deidentifier-base",
'PRESIDIO_SUPPORTED_ENTITIES': [
"LOCATION",
"PERSON",
"ORGANIZATION",
"AGE",
"ID",
"PHONE_NUMBER",
"EMAIL",
"DATE_TIME",
],
'LABELS_TO_IGNORE': ["O"],
'DEFAULT_EXPLANATION': "Identified as {} by transformers's Named Entity Recognition",
'SUB_WORD_AGGREGATION': 'simple',
'DATASET_TO_PRESIDIO_MAPPING': {"DATE": "DATE_TIME",
"DOCTOR": "PERSON",
"PATIENT": "PERSON",
"HOSPITAL": "LOCATION",
"MEDICALRECORD": "ID",
"IDNUM": "ID",
"ORGANIZATION": "ORGANIZATION",
"ZIP": "O",
"PHONE": "PHONE_NUMBER",
"USERNAME": "O",
"STREET": "O",
"PROFESSION": "O",
"COUNTRY": "LOCATION",
"LOCATION-OTHER": "LOCATION",
"FAX": "PHONE_NUMBER",
"EMAIL": "EMAIL",
"STATE": "LOCATION",
"DEVICE": "O",
"ORG": "ORGANIZATION",
"AGE": "O"
},
'MODEL_TO_PRESIDIO_MAPPING': {
"PER": "PERSON",
"PERSON": "PERSON",
"LOC": "LOCATION",
"ORG": "ORGANIZATION",
"AGE": "AGE",
"ID": "ID",
"PATIENT": "PERSON",
"HCW": "PERSON",
"HOSPITAL": "LOCATION",
"PATORG": "ORGANIZATION",
"DATE": "DATE_TIME",
"PHONE": "PHONE_NUMBER",
"VENDOR": "ORGANIZATION"
},
'CHUNK_OVERLAP_SIZE': 40,
'CHUNK_SIZE': 600
}
BERT_DEID_CONFIGURATION = {'PRESIDIO_SUPPORTED_ENTITIES': [
"LOCATION",
"PERSON",
"ORGANIZATION",
"AGE",
"ID",
"PHONE_NUMBER",
"EMAIL",
"DATE_TIME",
],
'DEFAULT_MODEL_PATH': "obi/deid_roberta_i2b2",
'LABELS_TO_IGNORE': ["O"],
'DEFAULT_EXPLANATION': "Identified as {} by transformers's Named Entity Recognition",
'SUB_WORD_AGGREGATION': 'simple',
'DATASET_TO_PRESIDIO_MAPPING': {"DATE": "DATE_TIME",
"DOCTOR": "PERSON",
"PATIENT": "PERSON",
"HOSPITAL": "ORGANIZATION",
"MEDICALRECORD": "ID",
"IDNUM": "ID",
"ORGANIZATION": "ORGANIZATION",
"ZIP": "O",
"PHONE": "PHONE_NUMBER",
"USERNAME": "O",
"STREET": "O",
"PROFESSION": "O",
"COUNTRY": "LOCATION",
"LOCATION-OTHER": "LOCATION",
"FAX": "PHONE_NUMBER",
"EMAIL": "EMAIL",
"STATE": "LOCATION",
"DEVICE": "O",
"ORG": "ORGANIZATION",
"AGE": "O"
},
'MODEL_TO_PRESIDIO_MAPPING': {
"PER": "PERSON",
"LOC": "LOCATION",
"ORG": "ORGANIZATION",
"AGE": "AGE",
"ID": "ID",
"EMAIL": "EMAIL",
"PATIENT": "PERSON",
"STAFF": "PERSON",
"HOSP": "ORGANIZATION",
"PATORG": "ORGANIZATION",
"DATE": "DATE_TIME",
"PHONE": "PHONE_NUMBER",
},
'CHUNK_OVERLAP_SIZE': 40,
'CHUNK_SIZE': 600
}